Difference between revisions of "Department datasets"
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| − | Students and staff often collect data but don't have the IRB permission to publish the primary dataset. This page documents some of the datasets we've collected that may still be available | + | == Rationale == |
| + | Students and staff often collect data but don't have the IRB permission to publish the primary dataset. This page documents some of the datasets we've previously collected that may still be available for easy re-use. Be mindful that re-using a dataset may require a new IRB request. | ||
| − | Each dataset should have | + | == Department scans == |
| − | * | + | For scans collected by our department the [[EA Server]] provides a way to query and bulk export them. |
| + | |||
| + | |||
| + | == Datasets == | ||
| + | Each dataset should have descriptive annotations, e.g.: | ||
| + | * The type of data it contains | ||
* When was it created | * When was it created | ||
* Who created it | * Who created it | ||
| − | * | + | * Where is it currently located |
| − | + | ||
| − | + | Note that not all datasets need to consist of scans. Spreadsheets, text files and videos may also be important data. | |
| − | == Oesophageal PET CT == | + | === Oesophageal PET CT === |
{| class="wikitable" | {| class="wikitable" | ||
Revision as of 21:02, 31 May 2022
Rationale
Students and staff often collect data but don't have the IRB permission to publish the primary dataset. This page documents some of the datasets we've previously collected that may still be available for easy re-use. Be mindful that re-using a dataset may require a new IRB request.
Department scans
For scans collected by our department the EA Server provides a way to query and bulk export them.
Datasets
Each dataset should have descriptive annotations, e.g.:
- The type of data it contains
- When was it created
- Who created it
- Where is it currently located
Note that not all datasets need to consist of scans. Spreadsheets, text files and videos may also be important data.
Oesophageal PET CT
| What | ~100 pretreatment PET/CT scans of + clinical data. OSCC patients. 2008-2017.
Inclusion criteria: ... |
| Why | Original Purpose: for predicting mandard score of patients, to avoid surgery. |
| When | 2018-2019 |
| Who | Dr Chiu et al. |
| How | EPR review. Scans were transfered from PACS to DVD.
IRB: ... |
| Where | On DVD (Dr Chiu) and on HPC (Jurgen). |
| Papers | NA |
